BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025G11LP1|AL428446
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1263 1802 0.0
>3x_Contig1263
Length = 6840
Score = 1802 bits (907), Expect = 0.0
Identities = 913/917 (99%)
Strand = Plus / Minus
Query: 1 atcaaagcttctatatctaaagtaactgagaagtctgcatttcagattattaagtcatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2880 atcaaagcttctatatctaaagtaactgagaagtctgcatttcagattattaagtcatat 2821
Query: 61 gtgaaatatcctagaagccaaattgatttaatatacgataatttgaatcaaataaaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2820 gtgaaatatcctagaagccaaattgatttaatatacgataatttgaatcaaataaaatcc 2761
Query: 121 aagacgaactgtaatgtggttattctaaacttacaaamcattcatgaatcaaatacatgg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2760 aagacgaactgtaatgtggttattctaaacttacaaaccattcatgaatcaaatacatgg 2701
Query: 181 tttgaacagctacccatctctgtaaacatcgatcctccaccaagtgcaacrggggtcata 240
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2700 tttgaacagctacccatctctgtaaacatcgatcctccaccaagtgcaacgagggtcata 2641
Query: 241 agtgtaggtggagtaggtggaaagtgcaaagtggcattggaaatgatcctaacactatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2640 agtgtaggtggagtaggtggaaagtgcaaagtggcattggaaatgatcctaacactatta 2581
Query: 301 gaaaccgggagtatctgatcccactgtcttatgttcaaacaaaatttaattcctcatcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2580 gaaaccgggagtatctgatcccactgtcttatgttcaaacaaaatttaattcctcatcgc 2521
Query: 361 cttcaatgggaatgtggtcggaggtttatggttatcatttattagaatgtatcccctata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2520 cttcaatgggaatgtggtcggaggtttatggttatcatttattagaatgtatcccctata 2461
Query: 421 gtataccactaatgataaaattaatgtagtatagacataacgtacataaatttgggacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2460 gtataccactaatgataaaattaatgtagtatagacataacgtacataaatttgggacta 2401
Query: 481 ggccccccgtatttccccccattacaagtcatcacctccctctttatctgtgtccgagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2400 ggccccccgtatttccccccattacaagtcatcacctccctctttatctgtgtccgagta 2341
Query: 541 tttctttaattcctcgattgcmaatgaatttgccaaccttactatcgaagcatgctgaaa 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2340 tttctttaattcctcgattgcaaatgaatttgccaaccttactatcgaagcatgctgaaa 2281
Query: 601 cataataatttaaatagaaaatagcttttcaagggcaataaaacaaagagtgaagtgaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2280 cataataatttaaatagaaaatagcttttcaagggcaataaaacaaagagtgaagtgaca 2221
Query: 661 aagcaaaacccaagaaagctccacttcatctttcagtaagcccattatacgctggcattg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2220 aagcaaaacccaagaaagctccacttcatctttcagtaagcccattatacgctggcattg 2161
Query: 721 tggcagttcaccatgtttgaaagaagtaaaaggaaatcctttttattcttcggaggctcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2160 tggcagttcaccatgtttgaaagaagtaaaaggaaatcctttttattcttcggaggctcc 2101
Query: 781 aaccaggatcaaaggaataaatcccaagaaactagcaatagccgtaactcctctagcgct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2100 aaccaggatcaaaggaataaatcccaagaaactagcaatagccgtaactcctctagcgct 2041
Query: 841 aaagctttgccgcaacacaagcccttacacaagcagcctctgaataatacccaaatgctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2040 aaagctttgccgcaacacaagcccttacacaagcagcctctgaataatacccaaatgctg 1981
Query: 901 aaagatgaggtcgaacc 917
|||||||||||||||||
Sbjct: 1980 aaagatgaggtcgaacc 1964
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6689
Number of Sequences: 1807
Number of extensions: 6689
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)